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Center for Genomic Diagnostics

To view the full list of publications across IGB's research portfolio, please visit our Illinois Experts page

2024

Zuo, Q., Park, N. H., Lee, J. K., Santaliz-Casiano, A., & Madak-Erdogan, Z. (2024). Navigating nonalcoholic fatty liver disease (NAFLD): Exploring the roles of estrogens, pharmacological and medical interventions, and life style. Steroids, 203, Article 109330. https://doi.org/10.1016/j.steroids.2023.109330

Zhu, H., Wu, J., Zhao, J., Yu, L., Liyarita, B. R., Xu, X., Xiao, Y., Hu, X., Shao, S., Liu, J., Wang, X., & Shao, F. (2024). Dual-functional DNA nanogels for anticancer drug delivery. Acta Biomaterialia, 175, 240-249. https://doi.org/10.1016/j.actbio.2023.12.013

Zhou, S., Lizarazo, S., Mouli, L., Chorghade, S., Cheng, R., Rajendra, K. C., Kalsotra, A., & Van Bortle, K. (2024). Cancer-associated snaR-A noncoding RNA interacts with core splicing machinery and disrupts processing of mRNA subpopulations. (bioRxiv : the preprint server for biology). https://doi.org/10.1101/2024.07.02.601767

Zhou, L., Xiong, Y., Dwivedy, A., Zheng, M., Cooper, L., Shepherd, S., Song, T., Hong, W., Le, L. T. P., Chen, X., Umrao, S., Rong, L., Wang, T., Cunningham, B. T., & Wang, X. (2024). Bioinspired designer DNA NanoGripper for virus sensing and potential inhibition. Science Robotics, 9(96), Article eadi2084. https://doi.org/10.1126/scirobotics.adi2084

Zhao, H. (2024). Synthetic Biology Continues to Grow. ACS synthetic biology, 13(1), 1-2. https://doi.org/10.1021/acssynbio.3c00765

Zhao, Y., Park, I., Rubakhin, S. S., Bashir, R., Vlasov, Y., & Sweedler, J. V. (2024). 1-Octanol-assisted ultra-small volume droplet microfluidics with nanoelectrospray ionization mass spectrometry. Analytica Chimica Acta, 1321, Article 342998. https://doi.org/10.1016/j.aca.2024.342998

Zhao, H., Cao, M., Tran, V., & Fatma, Z. (2024). Genetic Toolbox For Metabolic Engineering Of Non-conventional Yeast. (U.S. Patent No. 12116580).

Zhao, S., Gao, K., Han, H., Stenzel, M., Yin, B., Song, H., Lawanprasert, A., Nielsen, J. E., Sharma, R., Arogundade, O. H., Pimcharoen, S., Chen, Y. J., Paul, A., Tuma, J., Collins, M. G., Wyle, Y., Cranick, M. G., Burgstone, B. W., Perez, B. S., ... Murthy, N. (2024). Acid-degradable lipid nanoparticles enhance the delivery of mRNA. Nature Nanotechnology, 19(11), 1702-1711. https://doi.org/10.1038/s41565-024-01765-4

Zhang, X., Sands, M., Lin, M., Guelfo, J., & Irudayaraj, J. (2024). In vitro toxicity of Lithium bis(trifluoromethanesulfonyl)imide (LiTFSI) on Human Renal and Hepatoma Cells. Toxicology Reports, 12, 280-288. https://doi.org/10.1016/j.toxrep.2024.02.008

Yuan, F., Yang, L., Hsiao, S. H., Herndon, N. L., Gaulke, C. A., & Fang, Y. (2024). A neonatal piglet model reveals interactions between nasal microbiota and influenza A virus pathogenesis. Virology, 592, Article 109996. https://doi.org/10.1016/j.virol.2024.109996

You, J. S., Karaman, K., Reyes-Ordoñez, A., Lee, S., Kim, Y., Bashir, R., & Chen, J. (2024). Leucyl-tRNA Synthetase Contributes to Muscle Weakness through Mammalian Target of Rapamycin Complex 1 Activation and Autophagy Suppression in a Mouse Model of Duchenne Muscular Dystrophy. American Journal of Pathology, 194(8), 1571-1580. https://doi.org/10.1016/j.ajpath.2024.04.006

Xun, G., Zhu, Z., Singh, N., Lu, J., Jain, P. K., & Zhao, H. (2024). Harnessing noncanonical crRNA for highly efficient genome editing. Nature communications, 15(1), Article 3823. https://doi.org/10.1038/s41467-024-48012-x

Wang, Y., Saha, U., Rubakhin, S. S., Roy, E. J., Smith, A. M., Sweedler, J. V., & Lam, F. (2024). High-resolution 1H-MRSI at 9.4 T by integrating relaxation enhancement and subspace imaging. NMR in Biomedicine, 37(10), Article e5161. https://doi.org/10.1002/nbm.5161

Wang, Q., Zhang, Z., Li, H., Liu, X., Han, J., Zhao, H., & Ji, H. (2024). Chem-FINESE: Validating Fine-Grained Few-shot Entity Extraction through Text Reconstruction. In Y. Graham, M. Purver, & M. Purver (Eds.), EACL 2024 - 18th Conference of the European Chapter of the Association for Computational Linguistics, Findings of EACL 2024 (pp. 1-16). (EACL 2024 - 18th Conference of the European Chapter of the Association for Computational Linguistics, Findings of EACL 2024). Association for Computational Linguistics (ACL).

Wang, H., & Zhao, Y. (2024). Plasmon-enhanced chiral absorption through electric dipole–electric quadrupole interaction. Journal of Optics, 26(8), Article 085002. https://doi.org/10.1088/2040-8986/ad535e

Wang, Y., Chembazhi, U. V., Yee, D., Chen, S., Ji, J., Wang, Y., Nguyen, KL., Lin, P., Ratti, A., Hess, RA., Qiao, H., Ko, C., Yang, J., Kalsotra, A., & Mei, W. (2024). PTBP1 mediates Sertoli cell actin cytoskeleton organization by regulating alternative splicing of actin regulators. Nucleic acids research, 52(20), 12244-12261. Article gkae862. https://doi.org/10.1093/nar/gkae862

Walukiewicz, H. E., Farris, Y., Burnet, M. C., Feid, S. C., You, Y., Kim, H., Bank, T., Christensen, D., Payne, S. H., Wolfe, A. J., Rao, C. V., & Nakayasu, E. S. (2024). Regulation of bacterial stringent response by an evolutionarily conserved ribosomal protein L11 methylation. mBio, 15(10), Article 01773. https://doi.org/10.1128/mbio.01773-24

Umrao, S., Zheng, M., & Wang, X. (2024). Net-Shaped DNA Nanostructure-Based Lateral Flow Assays for Rapid and Sensitive SARS-CoV-2 Detection. Analytical Chemistry, 96(8), 3291-3299. https://doi.org/10.1021/acs.analchem.3c03698

Tran, V. G., Mishra, S., Bhagwat, S. S., Shafaei, S., Shen, Y., Allen, J. L., Crosly, B. A., Tan, S. I., Fatma, Z., Rabinowitz, J. D., Guest, J. S., Singh, V., & Zhao, H. (2024). Correction to: An end-to-end pipeline for succinic acid production at an industrially relevant scale using Issatchenkia orientalis (Nature Communications, (2023), 14, 1, (6152), 10.1038/s41467-023-41616-9). Nature communications, 15(1), Article 1161. https://doi.org/10.1038/s41467-024-45331-x

Tan, S. I., Ng, I. S., & Zhao, H. (in press). Metabolic Engineering of Nonmodel Yeast Issatchenkia orientalis SD108 for 5-Aminolevulinic Acid Production. Biotechnology and bioengineering. https://doi.org/10.1002/bit.28877

Stinson, J. A., Barbosa, M. M. P., Sheen, A., Momin, N., Fink, E., Hampel, J., Selting, K. A., Kamerer, R. L., Bailey, K. L., Wittrup, K. D., & Fan, T. M. (2024). Tumor-Localized Interleukin-2 and Interleukin-12 Combine with Radiation Therapy to Safely Potentiate Regression of Advanced Malignant Melanoma in Pet Dogs. Clinical Cancer Research, 30(18), 4029-4043. https://doi.org/10.1158/1078-0432.CCR-24-0861

Song, T., Cooper, L., Galván Achi, J., Wang, X., Dwivedy, A., Rong, L., & Wang, X. (2024). Polyvalent Nanobody Structure Designed for Boosting SARS-CoV-2 Inhibition. Journal of the American Chemical Society, 146(9), 5894-5900. https://doi.org/10.1021/jacs.3c11760

Sivaguru, M., Mori, S., Fouke, K. W., Ajijola, O. A., Shivkumar, K., Samuel, A. Z., Bhargava, R., & Fouke, B. W. (2024). Osteopontin stabilization and collagen containment slows amorphous calcium phosphate transformation during human aortic valve leaflet calcification. Scientific reports, 14(1), Article 12222. https://doi.org/10.1038/s41598-024-62962-8

Sima, J., Wu, C., Milenkovic, O., & Szpankowski, W. (2024). Online Distribution Learning with Local Privacy Constraints. Proceedings of Machine Learning Research, 238, 460-468.

Shinn, L. M., Mansharamani, A., Baer, D. J., Novotny, J. A., Charron, C. S., Khan, N. A., Zhu, R., & Holscher, H. D. (2024). Fecal Metagenomics to Identify Biomarkers of Food Intake in Healthy Adults: Findings from Randomized, Controlled, Nutrition Trials. Journal of Nutrition, 154(1), 271-283. https://doi.org/10.1016/j.tjnut.2023.11.001

Shi, C., Patel, V. A., Mitchell, D. A., & Zhao, H. (2024). Enterolyin S, a Polythiazole-containing Hemolytic Peptide from Enterococcus caccae. ChemBioChem, 25(12), Article e202400212. https://doi.org/10.1002/cbic.202400212

Shen, Y., Dinh, H. V., Cruz, E. R., Chen, Z., Bartman, C. R., Xiao, T., Call, C. M., Ryseck, R. P., Pratas, J., Weilandt, D., Baron, H., Subramanian, A., Fatma, Z., Wu, Z. Y., Dwaraknath, S., Hendry, J. I., Tran, V. G., Yang, L., Yoshikuni, Y., ... Rabinowitz, J. D. (2024). Mitochondrial ATP generation is more proteome efficient than glycolysis. Nature chemical biology, 20(9), 1123-1132. https://doi.org/10.1038/s41589-024-01571-y

Sands, M., Zhang, X., gal, A., Laws, M., Spinella, M., Erdogan, Z. M., & Irudayaraj, J. (2024). Comparative hepatotoxicity of novel lithium bis(trifluoromethanesulfonyl)imide (LiTFSI, ie. HQ-115) and legacy Perfluorooctanoic acid (PFOA) in male mice: Insights into epigenetic mechanisms and pathway-specific responses. Environment international, 185, Article 108556. https://doi.org/10.1016/j.envint.2024.108556

Sands, M., Zhang, X., Jensen, T., La Frano, M., Lin, M., & Irudayaraj, J. (2024). PFAS assessment in fish – Samples from Illinois waters. Science of the Total Environment, 927, Article 172357. https://doi.org/10.1016/j.scitotenv.2024.172357

Saba, C. F., Fan, T. M., Phillips, B. S., Wright, Z. M., & Thamm, D. H. (2024). Alternating rabacfosadine and doxorubicin for treatment of naïve canine lymphoma. Veterinary and comparative oncology, 22(2), 278-283. https://doi.org/10.1111/vco.12975

Ren, H., Huang, C., Pan, Y., Dommaraju, S. R., Cui, H., Li, M., Gadgil, M. G., Mitchell, D. A., & Zhao, H. (2024). Non-modular fatty acid synthases yield distinct N-terminal acylation in ribosomal peptides. Nature Chemistry, 16(8), 1320-1329. https://doi.org/10.1038/s41557-024-01491-3

Ren, W., Sands, M., Han, X., Tsipursky, M., & Irudayaraj, J. (2024). Hydrogel-Based Oxygen and Drug Delivery Dressing for Improved Wound Healing. ACS Omega, 9(22), 24095-24104. https://doi.org/10.1021/acsomega.4c03324

Ranoa, D. R. E., Holland, R. L., Alnaji, F. G., Green, K. J., Wang, L., Brooke, C. B., Burke, M. D., Fan, T. M., & Hergenrother, P. J. (2024). Saliva-based molecular testing for SARS-CoV-2. (U.S. Patent No. 11926877).

Rana, V., Peng, J., Pan, C., Lyu, H., Cheng, A., Kim, M., & Milenkovic, O. (2024). Interpretable online network dictionary learning for inferring long-range chromatin interactions. PLoS computational biology, 20(5 MAY), Article e1012095. https://doi.org/10.1371/journal.pcbi.1012095

Quinn, T. P., Hess, J. L., Marshe, V. S., Barnett, M. M., Hauschild, A. C., Maciukiewicz, M., Elsheikh, S. S. M., Men, X., Schwarz, E., Trakadis, Y. J., Breen, M. S., Barnett, E. J., Zhang-James, Y., Ahsen, M. E., Cao, H., Chen, J., Hou, J., Salekin, A., Lin, P. I., ... Glatt, S. J. (2024). A primer on the use of machine learning to distil knowledge from data in biological psychiatry. Molecular Psychiatry, 29(2), 387-401. https://doi.org/10.1038/s41380-023-02334-2

Peh, G. R., Tay, T., Tan, L. L., Tiong, E., Bi, J., Goh, Y. L., Ye, S., Lin, F., Tan, C. J. X., Tan, Y. Z., Wong, J., Zhao, H., Wong, F. T., Ang, E. L., & Lim, Y. H. (2024). Site-selective chlorination of pyrrolic heterocycles by flavin dependent enzyme PrnC. Communications Chemistry, 7(1), Article 7. https://doi.org/10.1038/s42004-023-01083-1

Park, I., Kim, S., Brenden, C. K., Shi, W., Iyer, H., Bashir, R., & Vlasov, Y. (2024). Highly Localized Chemical Sampling at Subsecond Temporal Resolution Enabled with a Silicon Nanodialysis Platform at Nanoliter per Minute Flows. ACS Nano, 18(9), 6963-6974. https://doi.org/10.1021/acsnano.3c09776

Oltman, C. G., Kim, T. P., Lee, J. W. Y., Lupu, J. D., Zhu, R., & Moussa, I. D. (2024). Prevalence, Management, and Comorbidities of Adults With Atrial Fibrillation in the United States, 2019 to 2023. JACC: Advances, 3(11), Article 101330. https://doi.org/10.1016/j.jacadv.2024.101330

Oh, C., Xun, G., Lane, S. T., Petrov, V. A., Zhao, H., & Nguyen, T. H. (2024). Portable, single nucleotide polymorphism-specific duplex assay for virus surveillance in wastewater. Science of the Total Environment, 912, Article 168701. https://doi.org/10.1016/j.scitotenv.2023.168701

Nik Zulkarnine, N. H., Faramarzi, V., Huang, S., Chandrasekar, N., Perala, R. S., Park, J. S., Koprowski, K., Chen, S., Zhang, Y., Darsi, S., Adoni, M., Kim, A. Y., Baek, J., Valera, E., Ryu, J., van der Zande, A. M., Kim, M. J., Park, I., Bashir, R., & Hwang, M. T. (in press). Multi-modal biosensing enabled by on-chip nano-corrugated graphene. Device, Article 100572. https://doi.org/10.1016/j.device.2024.100572

Nambiar, A., Pan, C., Rana, V., Cheraghchi, M., Ribeiro, J., Maslov, S., & Milenkovic, O. (2024). Semi-quantitative group testing for efficient and accurate qPCR screening of pathogens with a wide range of loads. BMC bioinformatics, 25(1), Article 195. https://doi.org/10.1186/s12859-024-05798-3

Moustakides, G. V., Liu, X., & Milenkovic, O. (2024). Optimal stopping methodology for the secretary problem with random queries. Journal of Applied Probability, 61(2), 578-602. https://doi.org/10.1017/jpr.2023.61

Monaco, M. H., Coyne, S., Wang, M., Flaws, J. A., Irudayaraj, J. M., Cann, I., & Donovan, S. M. (2024). Effects of early life exposure to di(2-ethylhexyl) phthalate on jejunal morphology, sucrase activity, and colonic microbiota composition in young pigs. Journal of Environmental Exposure Assessment, 3(3), Article 18. https://doi.org/10.20517/jeea.2024.10

Mogol, A. N., Kaminsky, A. Z., Dutton, D. J., & Madak Erdogan, Z. (2024). Targeting NAD+ metabolism: Pre-clinical insights into potential cancer therapy strategies. Endocrinology, 165(5), Article bqae043. https://doi.org/10.1210/endocr/bqae043

Mishra, S., Deewan, A., Zhao, H., & Rao, C. V. (2024). Nitrogen starvation causes lipid remodeling in Rhodotorula toruloides. Microbial cell factories, 23(1), Article 141. https://doi.org/10.1186/s12934-024-02414-0

Madak-Erdogan, Z., Hammes, S. R., & Furkan Burak, M. (2024). From Fundamentals to the Clinic: Advancing Obesity Research in Endocrinology. Journal of the Endocrine Society, 8(6). https://doi.org/10.1210/jendso/bvae066

Ma, K., Xue, B., Chu, R., Zheng, Y., Sharma, S., Jiang, L., Hu, M., Xie, Y., Hu, Y., Tao, T., Zhou, Y., Liu, D., Li, Z., Yang, Q., Chen, Y., Wu, S., Tong, Y., Robinson, R. C., Yew, W. S., ... Zhang, Y. (2024). A Widespread Radical-Mediated Glycolysis Pathway. Journal of the American Chemical Society, 146(38), 26187-26197. https://doi.org/10.1021/jacs.4c07718

Lu, J., Baby, A., Asserghine, A., Rodríguez-López, J., & Zhao, H. (2024). Amino acid based ionic liquids for revitalization of sulfated lead anodes. Journal of Power Sources, 591, Article 233824. https://doi.org/10.1016/j.jpowsour.2023.233824

Liu, L., Bhaskar, S., & Cunningham, B. T. (2024). Hybrid interfacial cryosoret nano-engineering in photonic resonator interferometric scattering microscopy: Insights from nanoparticles and nano-assemblies. Applied Physics Letters, 124(23), Article 234101. https://doi.org/10.1063/5.0203701

Liu, L., Tibbs, J., Li, N., Bacon, A., Shepherd, S., Lee, H., Chauhan, N., Demirci, U., Wang, X., & Cunningham, B. T. (2024). A Photonic Resonator Interferometric Scattering Microscope for Label-free Imaging of Bio-nanoparticles in Point-of-use Environments. Paper presented at CLEO: Applications and Technology in CLEO 2024, CLEO: A and T 2024 - Part of Conference on Lasers and Electro-Optics, Charlotte, United States.

Liu, W., Ayupova, T., Wang, W., Shepherd, S., Wang, X., Akin, L. D., Kohli, M., Demirci, U., & Cunningham, B. T. (2024). Dynamic and large field of view photonic resonator absorption microscopy for ultrasensitive digital resolution detection of nucleic acid and protein biomarkers. Biosensors and Bioelectronics, 264, Article 116643. https://doi.org/10.1016/j.bios.2024.116643

Lim, J., Zhou, S., Baek, J., Kim, A. Y., Valera, E., Sweedler, J., & Bashir, R. (2024). A Blood Drying Process for DNA Amplification. Small, 20(11), Article 2307959. https://doi.org/10.1002/smll.202307959

Lim, J., Hwang, J., Min, H., Wester, M., Kim, C., Valera, E., Kong, H. J., & Bashir, R. (2024). Dried Blood Matrix as a New Material for the Detection of DNA Viruses. Advanced Healthcare Materials, 13(29), Article 2402506. https://doi.org/10.1002/adhm.202402506

Lim, J., Koprowski, K., Stavins, R., Xuan, N., Hoang, T. H., Baek, J., Kindratenko, V., Khaertdinova, L., Kim, A. Y., Do, M., King, W. P., Valera, E., & Bashir, R. (in press). Point-of-Care Multiplex Detection of Respiratory Viruses. ACS Sensors, 9(8), 4058-4068. https://doi.org/10.1021/acssensors.4c00992

Liao, C., Priyanka, P., Lai, Y. H., Rao, C. V., & Lu, T. (2024). How Does Escherichia coli Allocate Proteome? ACS synthetic biology, 13(9), 2718-2732. https://doi.org/10.1021/acssynbio.3c00537

Li, M., Harrison, W., Zhang, Z., Yuan, Y., & Zhao, H. (2024). Remote stereocontrol with azaarenes via enzymatic hydrogen atom transfer. Nature Chemistry, 16(2), 277-284. https://doi.org/10.1038/s41557-023-01368-x

Li, M., Yuan, Y., Harrison, W., Zhang, Z., & Zhao, H. (2024). Asymmetric photoenzymatic incorporation of fluorinated motifs into olefins. Science (New York, N.Y.), 385(6707), 416-421. https://doi.org/10.1126/science.adk8464

Lee, Y. G., Kang, N. K., Kim, C., Tran, V. G., Cao, M., Yoshikuni, Y., Zhao, H., & Jin, Y. S. (2024). Self-Buffering system for Cost-Effective production of lactic acid from glucose and xylose using Acid-Tolerant Issatchenkia orientalis. Bioresource Technology, 399, Article 130641. https://doi.org/10.1016/j.biortech.2024.130641

Lee, W., & Smith, A. M. (2024). Interdiffusion-enhanced cation exchange for HgSe and HgCdSe nanocrystals with infrared bandgaps. Nature Synthesis, 3(10), 1243-1254. https://doi.org/10.1038/s44160-024-00597-3

Le, L. T. P., Nguyen, A. H. Q., Phan, L. M. T., Ngo, H. T. T., Wang, X., Cunningham, B., Valera, E., Bashir, R., Taylor-Robinson, A. W., & Do, C. D. (2024). Current smartphone-assisted point-of-care cancer detection: Towards supporting personalized cancer monitoring. TrAC - Trends in Analytical Chemistry, 174, Article 117681. https://doi.org/10.1016/j.trac.2024.117681

Law, Y. S., Muthaliff, N. A., Wei, Y., Lin, F., Zhao, H., & Ang, E. L. (2024). Biochemical Investigation and Engineering of a Tardigrade X Family DNA Polymerase for Template-Independent DNA Synthesis. ACS Catalysis, 14(16), 12318-12330. https://doi.org/10.1021/acscatal.4c00756

Kolossov, V. L., Kanakaraju, K., Sarkar, S., Arogundade, O. H., Kuo, C. W., Mara, N. R., & Smith, A. M. (2024). Quantum Dot-Fab′ Conjugates as Compact Immunolabels for Microtubule Imaging and Cell Classification. ACS Nano, 18(23), 15084-15095. https://doi.org/10.1021/acsnano.4c02215

Koh, H. G., Yook, S., Oh, H., Rao, C. V., & Jin, Y. S. (2024). Toward rapid and efficient utilization of nonconventional substrates by nonconventional yeast strains. Current Opinion in Biotechnology, 85, Article 103059. https://doi.org/10.1016/j.copbio.2023.103059

Klumbys, E., Xu, W., Koduru, L., Heng, E., Wei, Y., Wong, F. T., Zhao, H., & Ang, E. L. (2024). Discovery, characterization, and engineering of an advantageous Streptomyces host for heterologous expression of natural product biosynthetic gene clusters. Microbial cell factories, 23(1), Article 149. https://doi.org/10.1186/s12934-024-02416-y

King, W. P., Bashir, R., Aydin, M., Berger, J., & Valera Cano, E. A. (2024). Microfluidic diagnostic device with a three-dimensional (3D) flow architecture. (U.S. Patent No. 11938480).

Khemtonglang, K., Liu, W., Lee, H., Wang, W., Li, S., Li, Z. Y., Shepherd, S., Yang, Y., Diel, D. G., Fang, Y., & Cunningham, B. T. (2024). Portable, smartphone-linked, and miniaturized photonic resonator absorption microscope (PRAM Mini) for point-of-care diagnostics. Biomedical Optics Express, 15(10), 5691-5705. https://doi.org/10.1364/BOE.531388

Jiang, G., Lu, J., Zhou, M., Harrison, W., & Zhao, H. (2024). Multifunctional Glucose Dehydrogenase Enabled Synthesis of Chiral-Bridged Bicyclic Nitrogen Heterocycles. ACS Catalysis, 14(9), 7074-7079. https://doi.org/10.1021/acscatal.4c00825

Jiang, L., Yang, Y., Huang, L., Zhou, Y., An, J., Zheng, Y., Chen, Y., Liu, Y., Huang, J., Ang, E. L., Zhao, S., Zhao, H., Liao, R., Wei, Y., & Zhang, Y. (2024). Glycyl Radical Enzymes Catalyzing the Dehydration of Two Isomers of N-Methyl-4-hydroxyproline. ACS Catalysis, 14(7), 4407-4422. https://doi.org/10.1021/acscatal.4c00216

Jeong, Y., Ahmad, S., & Irudayaraj, J. (2024). Dynamic Effect of β-Lactam Antibiotic Inactivation Due to the Inter- and Intraspecies Interaction of Drug-Resistant Microbes. ACS Biomaterials Science and Engineering, 10(3), 1461-1472. https://doi.org/10.1021/acsbiomaterials.3c01678

Jeong, Y., Han, X., Vyas, K., & Irudayaraj, J. (2024). Microbial β-Glucuronidase Hydrogel Beads Activate Chemotherapeutic Prodrug. ACS Applied Materials and Interfaces, 16(22), 28093-28103. https://doi.org/10.1021/acsami.4c02568

Jeong, Y., Hsieh, P. H., Phal, Y., Bhargava, R., & Irudayaraj, J. (2024). Label-Free Monitoring of Coculture System Dynamics: Probing Probiotic and Cancer Cell Interactions via Infrared Spectroscopic Imaging. Analytical Chemistry, 96(28), 11247-11254. https://doi.org/10.1021/acs.analchem.4c00894

Jankelow, A., Chen, C. L., Cowell, T. W., Espinosa de los Monteros, J., Bian, Z., Kindratenko, V., Koprowski, K., Darsi, S., Han, H. S., Valera, E., & Bashir, R. (in press). Multiplexed electrical detection of whole viruses from plasma in a microfluidic platform. Analyst, 149(4), 1190-1201. https://doi.org/10.1039/d3an01510f

Jain, S., Xun, G., & Zhao, H. (2024). Impact of Chromatin Organization and Epigenetics on CRISPR-Cas and TALEN Genome Editing. ACS synthetic biology, 13(10), 3056-3068. https://doi.org/10.1021/acssynbio.4c00099

Ivanov, A., Mukherjee, U. K., Bose, S., Seshadri, S., Watkins, R., England, A. C., Suriano, J., Ahsen, M. E., & Souyris, S. (2024). COVID-19 test-to-stay program for K-12 schools: Opt-in versus opt-out consent model. iScience, 27(1), Article 108770. https://doi.org/10.1016/j.isci.2023.108770

Hur, S. W., Kwon, M., Manoharaan, R., Mohammadi, M. H., Samuel, A. Z., Mulligan, M. P., Hergenrother, P. J., & Bhargava, R. (2024). Capturing cell morphology dynamics with high temporal resolution using single-shot quantitative phase gradient imaging. Journal of biomedical optics, 29, S22712. https://doi.org/10.1117/1.JBO.29.S2.S22712

Huang, K.-Y., Upadhyay, G., Ahn, Y., Sakakura, M., Pagan-Diaz, G. J., Cho, Y., Weiss, A. C., Huang, C., Mitchell, J. W., Li, J., Tan, Y., Deng, Y.-H., Ellis-Mohr, A., Dou, Z., Zhang, X., Kang, S., Chen, Q., Sweedler, J. V., Im, S. G., ... Kong, H. (2024). Neuronal innervation regulates the secretion of neurotrophic myokines and exosomes from skeletal muscle. Proceedings of the National Academy of Sciences, 121(19), Article e2313590121. https://doi.org/10.1073/pnas.2313590121

Heath, H., Mogol, A. N., Santaliz Casiano, A., Zuo, Q., & Madak-Erdogan, Z. (2024). Targeting systemic and gut microbial metabolism in ER+ breast cancer. Trends in Endocrinology and Metabolism, 35(4), 321-330. https://doi.org/10.1016/j.tem.2023.12.008

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2022

Milenkovic, O., Hernandez, A. G., Zhao, H., & Tabatabaei, S. (2022). Nick-based Data Storage In Native Nucleic Acids. (U.S. Patent No. 11538554).

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Liu, Y., Wei, Y., Teh, T. M., Liu, D., Zhou, Y., Zhao, S., Ang, E. L., Zhao, H., & Zhang, Y. (2022). Identification and Characterization of the Biosynthetic Pathway of the Sulfonolipid Capnine. Biochemistry, 61(24), 2861-2869. https://doi.org/10.1021/acs.biochem.2c00102

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Han, Z., Vaidya, R. M., Arogundade, O. H., Ma, L., Zahid, M. U., Sarkar, S., Kuo, C. W., Selvin, P. R., & Smith, A. M. (Accepted/In press). Structural Design of Multidentate Copolymers as Compact Quantum Dot Coatings for Live-Cell Single-Particle Imaging. Chemistry of Materials. https://doi.org/10.1021/acs.chemmater.2c00498

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